STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0818PFAM: type II and III secretion system protein; KEGG: pca:Pcar_0870 type II secretory pathway component PulD-like; Belongs to the bacterial secretin family. (767 aa)    
Predicted Functional Partners:
Ppro_0816
PFAM: type II secretion system protein; KEGG: ttj:TTHA0794 pilus assembly protein PilC.
 
  
 0.893
Ppro_0815
PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: tte:TTE1262 predicted ATPases involved in pili biogenesis, PilB homologs.
 
  
 0.889
Ppro_0814
Twitching motility protein; KEGG: tte:TTE1263 predicted ATPases involved in pili biogenesis, PilT homologs; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase.
 
   
 0.825
Ppro_1414
KEGG: gme:Gmet_0550 hypothetical protein.
  
  
 0.794
Ppro_0817
Hypothetical protein.
       0.773
Ppro_0812
Hypothetical protein.
       0.768
Ppro_0813
Hypothetical protein.
       0.757
Ppro_0809
Hypothetical protein; KEGG: tbd:Tbd_1441 type II secretion system protein G.
 
     0.704
Ppro_0811
Hypothetical protein.
  
  
 0.663
Ppro_0516
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gsu:GSU3191 TPR domain protein.
  
  
 0.653
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.