STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0857PFAM: permease; KEGG: gme:Gmet_0519 permease. (315 aa)    
Predicted Functional Partners:
Ppro_0856
TIGRFAM: redox-active disulfide protein 2; PFAM: glutaredoxin; KEGG: gsu:GSU2956 redox-active disulfide protein 2.
 
  
 0.930
Ppro_0862
KEGG: cte:CT1727 glutaredoxin family protein.
 
  
 0.819
Ppro_0149
KEGG: gsu:GSU2956 redox-active disulfide protein 2.
 
  
 0.804
Ppro_0858
Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.753
Ppro_0854
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: gsu:GSU2958 thiol:disulfide interchange protein, putative.
 
     0.729
Ppro_0855
Transcriptional regulator, Fis family; PFAM: Thioredoxin domain; KEGG: gme:Gmet_0517 thioredoxin-related protein.
  
  
 0.714
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
    0.565
Ppro_1874
KEGG: bfs:BF1102 conserved hypothetical protein with RecF/RecN/SMC N-terminal domain.
   
    0.563
Ppro_0863
PFAM: regulatory protein, ArsR; KEGG: gsu:GSU2952 transcriptional regulator, ArsR family.
 
  
 0.538
Ppro_0860
Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: bld:BLi03879 YwoH.
     
 0.454
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.