STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0899KEGG: pca:Pcar_3008 hypothetical protein. (282 aa)    
Predicted Functional Partners:
Ppro_0898
Hypothetical protein.
       0.773
Ppro_1131
Hypothetical protein.
      
 0.483
Ppro_1132
Hypothetical protein.
      
 0.483
Ppro_1133
Desulfoferrodoxin; KEGG: pca:Pcar_2347 desulfoferrodoxin; TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin, ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein.
      
 0.483
Ppro_1137
TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rba:RB3959 hypothetical protein.
      
 0.483
Ppro_1367
TIGRFAM: phage and plasmid primase, P4 family; PFAM: Poxvirus D5 protein; KEGG: rso:RSc3229 putative bacteriophage-related protein.
      
 0.483
Ppro_1368
Hypothetical protein.
      
 0.483
Ppro_1923
Hypothetical protein.
      
 0.483
Ppro_0897
Hypothetical protein.
       0.420
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.