STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0900PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sat:SYN_02542 hypothetical membrane protein. (354 aa)    
Predicted Functional Partners:
Ppro_2495
TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; KEGG: gme:Gmet_1300 cysteine desulphurase related, unknown function.
    
   0.841
Ppro_0903
Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: dar:Daro_3350 response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal:Hpt.
  
    0.570
Ppro_0902
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: gsu:GSU1927 sensory box/response regulator.
  
  
 0.549
Ppro_0901
KEGG: gme:Gmet_1668 putative transmembrane protein.
       0.529
Ppro_2516
PFAM: conserved hypothetical protein 374; KEGG: gme:Gmet_1389 hypothetical protein.
  
  
 0.511
Ppro_3035
KEGG: sat:SYN_02645 hypothetical membrane protein.
  
     0.506
Ppro_0441
OmpA/MotB domain protein; PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; KEGG: gsu:GSU0360 OmpA domain protein.
  
  
 0.483
Ppro_2156
PFAM: FAD dependent oxidoreductase; KEGG: pfl:PFL_5481 hypothetical protein.
   
    0.477
Ppro_1471
KEGG: sat:SYN_01061 hypothetical cytosolic protein.
  
     0.455
pheT
KEGG: gme:Gmet_1416 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit.
 
     0.423
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.