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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0911PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pca:Pcar_2660 coenzyme PQQ synthesis protein-like. (497 aa)    
Predicted Functional Partners:
Ppro_0915
KEGG: pca:Pcar_2655 hypothetical protein.
 
 
   0.949
Ppro_0912
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.935
Ppro_0913
KEGG: pca:Pcar_2657 exporter-like.
 
   
 0.930
Ppro_0922
PFAM: lipid A biosynthesis acyltransferase; KEGG: dps:DP1851 hypothetical protein.
 
   
 0.923
Ppro_0919
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mta:Moth_0831 radical SAM.
 
    0.917
Ppro_0920
PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dps:DP1853 similar to methyltransferase.
 
    0.916
Ppro_0921
PFAM: glycosyl transferase, family 2; KEGG: pca:Pcar_2653 dolichyl-phosphate mannose synthase-like.
 
     0.902
Ppro_0923
KEGG: pca:Pcar_2651 acyl-carrier protein-like.
 
     0.869
Ppro_0909
PFAM: phospholipid/glycerol acyltransferase; KEGG: pca:Pcar_2662 hypothetical protein.
 
    0.844
Ppro_0916
PFAM: thioesterase superfamily protein; KEGG: dps:DP1841 hypothetical protein.
 
    0.840
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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