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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_0989KEGG: gsu:GSU2036 hypothetical protein. (131 aa)    
Predicted Functional Partners:
Ppro_0990
KEGG: gsu:GSU2035 hypothetical protein.
  
  
 0.970
Ppro_0988
KEGG: gsu:GSU2037 hypothetical protein.
  
  
 0.967
Ppro_0987
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; KEGG: gsu:GSU2038 hypothetical protein.
  
  
 0.940
Ppro_1656
KEGG: gsu:GSU1496 pilin domain protein.
  
  
 0.734
Ppro_2413
PFAM: type II secretion system protein G; KEGG: gme:Gmet_1857 N-terminal methylation.
  
  
 0.734
Ppro_0809
Hypothetical protein; KEGG: tbd:Tbd_1441 type II secretion system protein G.
  
  
 0.722
Ppro_0991
KEGG: gsu:GSU2034 hypothetical protein.
       0.677
Ppro_0986
Hypothetical protein.
       0.645
Ppro_0985
Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
       0.632
Ppro_0993
PFAM: Fimbrial assembly family protein; KEGG: gsu:GSU2031 type IV pilus biogenesis protein PilN.
     
 0.554
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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