close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1007KEGG: gme:Gmet_1436 hypothetical protein. (386 aa)    
Predicted Functional Partners:
Ppro_1010
KEGG: gme:Gmet_1436 hypothetical protein.
 
     0.975
Ppro_2000
KEGG: pca:Pcar_2846 conserved hypothetical protein; putative signal peptide.
  
     0.740
Ppro_1208
PFAM: extracellular solute-binding protein, family 1; KEGG: pca:Pcar_0492 spermidine/putrescine-binding periplasmic protein-like.
  
     0.671
Ppro_1218
KEGG: pca:Pcar_0459 hypothetical protein.
  
     0.665
Ppro_1205
KEGG: pfl:PFL_2070 hypothetical protein.
  
     0.582
Ppro_3142
PFAM: Roadblock/LC7 family protein; KEGG: pca:Pcar_2475 hypothetical protein.
  
     0.566
Ppro_1770
PFAM: transposase, IS4 family protein; KEGG: bha:BH0691 transposase (15).
  
    0.522
Ppro_1828
PFAM: transposase, IS4 family protein; KEGG: bha:BH0691 transposase (15).
  
    0.519
Ppro_2500
PFAM: transposase, IS4 family protein; KEGG: bha:BH0691 transposase (15).
  
    0.519
Ppro_2618
PFAM: transposase, IS4 family protein; KEGG: bha:BH0691 transposase (15).
  
    0.519
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.