STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1102KEGG: gsu:GSU0638 hypothetical protein. (155 aa)    
Predicted Functional Partners:
Ppro_1101
KEGG: gme:Gmet_2874 hypothetical protein.
       0.774
Ppro_1103
Hypothetical protein.
       0.661
Ppro_1100
KEGG: gme:Gmet_2873 hypothetical protein.
 
     0.659
Ppro_2419
KEGG: gsu:GSU1782 putative type IV pilus assembly protein PilM.
  
     0.537
Ppro_1021
Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.528
Ppro_0423
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: gsu:GSU0286 PBS lyase heat-like repeat protein.
  
     0.510
ftsL
Septum formation initiator; Essential cell division protein; Belongs to the FtsL family.
  
     0.489
Ppro_1728
KEGG: gsu:GSU2224 response regulator.
  
     0.448
Ppro_0763
PFAM: AsmA family protein; KEGG: gsu:GSU0874 hypothetical protein.
  
     0.422
Ppro_0971
KEGG: gsu:GSU1890 hypothetical protein.
  
     0.413
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.