STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1141KEGG: dvu:DVUA0088 hypothetical protein. (336 aa)    
Predicted Functional Partners:
Ppro_1140
ABC-type uncharacterized transport system periplasmic component-like protein; KEGG: dvu:DVUA0088 hypothetical protein.
 
    
0.566
Ppro_2456
KEGG: ctc:CTC00544 hypothetical protein.
  
     0.489
xerD
Tyrosine recombinase XerD subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.451
Ppro_1143
Hypothetical protein.
       0.451
Ppro_1144
PFAM: beta-lactamase domain protein; KEGG: gsu:GSU1631 metallo-beta-lactamase family protein.
       0.451
Ppro_1040
KEGG: pca:Pcar_0332 hypothetical protein.
  
     0.430
Ppro_1429
KEGG: gme:Gmet_2749 hypothetical protein.
  
     0.419
Ppro_1530
KEGG: pca:Pcar_2385 hypothetical protein.
  
     0.417
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.