STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1214PFAM: transport system permease protein; KEGG: pca:Pcar_0463 putative ferrichrome ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (342 aa)    
Predicted Functional Partners:
Ppro_1212
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pca:Pcar_0465 membrane-bound iron(III) dicitrate transport protein.
 
 
 0.977
Ppro_1213
PFAM: periplasmic binding protein; KEGG: pca:Pcar_0464 ABC-type Fe3+-hydroxamate transport system periplasmic component-like.
 
 
 0.977
Ppro_2081
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH653 iron ABC transporter ATP-binding protein.
 
 
 0.952
Ppro_1463
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pca:Pcar_0155 ABC-type iron (III) transport system, ATPase component.
 
 
 0.950
Ppro_1258
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC01370 ferric enterobactin transport ATP-binding protein fepC.
 
 
 0.948
Ppro_2078
PFAM: periplasmic binding protein; KEGG: hpj:jhp1469 putative iron transport system substrate-binding protein.
 
 
 0.900
Ppro_1477
PFAM: periplasmic binding protein; KEGG: sat:SYN_01056 iron(III) dicitrate-binding protein.
 
 
 0.891
Ppro_1479
KEGG: sat:SYN_01051 iron(III) dicitrate-biding protein.
 
 
 0.844
Ppro_1469
PFAM: Radical SAM domain protein; KEGG: pca:Pcar_0158 hypothetical protein.
  
 
 0.710
Ppro_1484
PFAM: Radical SAM domain protein; KEGG: pca:Pcar_2049 hypothetical protein.
  
 
 0.710
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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