STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1445PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: chy:CHY_0691 2Fe-2S iron-sulfur cluster binding domain. (158 aa)    
Predicted Functional Partners:
Ppro_1444
PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: ppr:PBPRA1939 hypothetical dehydrogenase.
 
 0.999
Ppro_1446
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: ppr:PBPRA1941 hypothetical xanthine dehydrogenase.
 
 0.999
Ppro_1519
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bha:BH0748 xanthine dehydrogenase.
 
 0.997
Ppro_1512
PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: eba:ebA2062 medium FAD-binding subunit of molybdenum enzyme.
 
 0.996
Ppro_1551
Aldehyde dehydrogenase, molybdenum-binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: pca:Pcar_0220 aldehyde oxidoreductase.
 
 
0.870
Ppro_0865
PFAM: protein of unknown function DUF182; KEGG: pca:Pcar_0227 hypothetical protein.
 
  
 0.842
Ppro_1545
PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: pca:Pcar_0228 uncharacterized MobA-related protein-like.
 
  
 0.757
Ppro_0298
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: gsu:GSU0097 pyruvate ferredoxin/flavodoxin oxidoreductase.
     
 0.494
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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