STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1535PFAM: Nitrate reductase, gamma subunit; KEGG: dsy:DSY4518 hypothetical protein. (262 aa)    
Predicted Functional Partners:
Ppro_1534
PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: chy:CHY_2403 putative reductase, iron-sulfur cluster-binding subunit.
 
 
 0.966
Ppro_1536
PFAM: DsrC family protein; KEGG: chy:CHY_2402 dissimilatory sulfite reductase subunit C.
 
   
 0.961
Ppro_1199
Respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (NrfH) precursor; KEGG: gme:Gmet_0295 cytochrome c nitrite reductase, small subunit NrfH, putative.
     
 0.914
Ppro_1200
Respiratory nitrite reductase (cytochrome; PFAM: cytochrome c552; KEGG: gme:Gmet_0294 cytochrome c552; Belongs to the cytochrome c-552 family.
     
 0.905
Ppro_2999
KEGG: gsu:GSU0357 cytochrome c family protein; Belongs to the cytochrome c-552 family.
     
 0.905
Ppro_0038
PFAM: 2-nitropropane dioxygenase, NPD; KEGG: gme:Gmet_1293 2-nitropropane dioxygenase, NPD.
    
  0.903
Ppro_3135
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: dsy:DSY1921 hypothetical protein.
 
   
 0.738
Ppro_1533
KEGG: pca:Pcar_0224 hypothetical protein.
       0.705
Ppro_1550
Aldehyde dehydrogenase, iron-sulfur subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: pca:Pcar_0221 Fe-S oxidoreductase.
  
 
 0.551
Ppro_2541
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: dsy:DSY3356 hypothetical protein.
 
 
 0.518
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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