STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1603KEGG: gme:Gmet_2432 hypothetical protein. (155 aa)    
Predicted Functional Partners:
Ppro_1640
KEGG: gsu:GSU1924 IPT/TIG domain protein.
   
 
 0.919
Ppro_0464
KEGG: ppu:PP1661 dehydrogenase subunit, putative.
  
 
 0.881
Ppro_2199
KEGG: sat:SYN_01957 hypothetical membrane protein.
   
 
 0.860
tuf1
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.859
Ppro_0678
KEGG: gsu:GSU2871 translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu domain protein domain protein; elongation factor Tu, domain 2 protein.
  
 
 0.859
Ppro_2481
Succinate dehydrogenase subunit B; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gme:Gmet_2395 succinate dehydrogenase.
   
  
 0.821
Ppro_2540
PFAM: FAD linked oxidase domain protein; KEGG: dsy:DSY3357 hypothetical protein.
   
 
 0.800
Ppro_3253
PFAM: FAD linked oxidase domain protein; KEGG: gsu:GSU3296 glycolate oxidase subunit GlcD, putative.
   
 
 0.800
Ppro_3353
PFAM: surface antigen (D15); KEGG: gme:Gmet_3162 surface antigen (D15).
  
     0.738
Ppro_2319
KEGG: gme:Gmet_0489 hypothetical protein.
 
     0.720
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.