STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1750Hypothetical protein; KEGG: gme:Gmet_1347 phosphoesterase, PA-phosphatase related. (126 aa)    
Predicted Functional Partners:
Ppro_3619
KEGG: gme:Gmet_3557 lipoprotein, putative.
  
     0.579
Ppro_2546
KEGG: gme:Gmet_0927 rod shape-determining protein MreD, putative.
 
     0.470
Ppro_1749
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gsu:GSU1839 hydrolase, haloacid dehalogenase-like family.
       0.448
Ppro_3324
Cell division and transport-associated protein TolA; TIGRFAM: TonB family protein; KEGG: gme:Gmet_3539 TonB-like; TC 2.C.1.2.1.
 
     0.409
Ppro_2226
KEGG: pca:Pcar_0363 hypothetical protein.
  
     0.408
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.