STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1950PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: dvu:DVU2109 hypothetical protein. (112 aa)    
Predicted Functional Partners:
Ppro_1946
Cobyrinic acid a,c-diamide synthase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.957
Ppro_1929
Cobyrinic acid a,c-diamide synthase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.921
Ppro_1951
Cobyrinic acid a,c-diamide synthase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Cobyrinic acid a,c-diamide synthase; KEGG: pca:Pcar_1588 iron-sulfur cluster binding protein-like.
 
  
 0.918
Ppro_1954
Cobyrinic acid a,c-diamide synthase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Cobyrinic acid a,c-diamide synthase; KEGG: pca:Pcar_1585 hypothetical protein.
 
  
 0.884
Ppro_1955
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: pca:Pcar_1584 hypothetical protein.
 
     0.878
Ppro_1952
PFAM: beta-lactamase domain protein; KEGG: pca:Pcar_1589 hypothetical protein.
 
     0.797
Ppro_1945
PFAM: beta-lactamase domain protein; KEGG: gme:Gmet_3123 beta-lactamase-like.
 
     0.776
Ppro_1956
KEGG: sat:SYN_01170 hypothetical cytosolic protein.
 
     0.712
Ppro_1949
KEGG: pca:Pcar_0171 hypothetical protein.
       0.709
Ppro_1948
KEGG: pca:Pcar_1975 hypothetical protein.
       0.665
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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