STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1951Cobyrinic acid a,c-diamide synthase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Cobyrinic acid a,c-diamide synthase; KEGG: pca:Pcar_1588 iron-sulfur cluster binding protein-like. (305 aa)    
Predicted Functional Partners:
Ppro_1955
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: pca:Pcar_1584 hypothetical protein.
 
  
 0.921
Ppro_1950
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: dvu:DVU2109 hypothetical protein.
 
  
 0.918
Ppro_1952
PFAM: beta-lactamase domain protein; KEGG: pca:Pcar_1589 hypothetical protein.
 
     0.887
Ppro_1945
PFAM: beta-lactamase domain protein; KEGG: gme:Gmet_3123 beta-lactamase-like.
 
     0.811
Ppro_3135
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: dsy:DSY1921 hypothetical protein.
    
   0.755
Ppro_1954
Cobyrinic acid a,c-diamide synthase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Cobyrinic acid a,c-diamide synthase; KEGG: pca:Pcar_1585 hypothetical protein.
 
  
0.742
Ppro_3320
PFAM: beta-lactamase domain protein; KEGG: gme:Gmet_3123 beta-lactamase-like.
 
     0.727
Ppro_1953
PFAM: thioesterase superfamily protein; KEGG: dps:DP2749 hypothetical protein.
 
     0.702
Ppro_1956
KEGG: sat:SYN_01170 hypothetical cytosolic protein.
 
     0.681
Ppro_1957
KEGG: pca:Pcar_1581 hypothetical protein.
 
  
 0.651
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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