close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1970PFAM: Extracellular ligand-binding receptor; KEGG: gsu:GSU2389 ABC transporter, periplasmic substrate-binding protein, putative; TC 3.A.1.4.-. (372 aa)    
Predicted Functional Partners:
Ppro_1673
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: gme:Gmet_1821 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
Ppro_1672
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: gme:Gmet_1822 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.994
Ppro_1674
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_1820 ABC transporter-related protein; TC 3.A.1.4.-.
 
 
 0.994
Ppro_1675
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_1819 ABC transporter-related protein; TC 3.A.1.4.-.
 
 
 0.990
Ppro_1671
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: gme:Gmet_1823 extracellular ligand-binding receptor; TC 3.A.1.4.-.
  
  
 
0.929
Ppro_3459
PFAM: response regulator receiver; ANTAR domain protein; KEGG: gme:Gmet_0660 response regulator receiver (CheY-like) and ANTAR domain protein.
  
 
 0.850
Ppro_1972
KEGG: pca:Pcar_0299 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
       0.784
Ppro_1974
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; KEGG: pca:Pcar_1579 pyridine nucleotide-disulfide oxidoreductase/rhodanese domain protein.
  
  
 0.695
rpmE
LSU ribosomal protein L31P; Binds the 23S rRNA.
  
    0.538
Ppro_1969
PFAM: molybdopterin biosynthesis MoaE; KEGG: mhu:Mhun_0523 molybdopterin biosynthesis MoaE.
       0.483
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.