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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1973KEGG: gsu:GSU0729 iron-sulfur cluster-binding protein. (191 aa)    
Predicted Functional Partners:
Ppro_1974
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; KEGG: pca:Pcar_1579 pyridine nucleotide-disulfide oxidoreductase/rhodanese domain protein.
       0.663
Ppro_2159
Glutamate synthase (NADPH) GltB3 subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; glutamate synthase, alpha subunit domain protein; KEGG: pca:Pcar_2600 pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.642
Ppro_3096
Protein of unknown function DUF362; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF362; KEGG: gme:Gmet_3040 hypothetical protein.
 
 
 0.572
Ppro_0298
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: gsu:GSU0097 pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
 0.521
Ppro_1603
KEGG: gme:Gmet_2432 hypothetical protein.
  
  
 0.513
Ppro_1199
Respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (NrfH) precursor; KEGG: gme:Gmet_0295 cytochrome c nitrite reductase, small subunit NrfH, putative.
  
 
 0.507
Ppro_2900
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: gme:Gmet_2772 copper-translocating P-type ATPase:heavy metal translocating P-type ATPase.
  
  
 0.443
Ppro_1575
KEGG: gme:Gmet_2301 cytochrome c family protein.
  
 
 0.428
Ppro_1577
KEGG: gme:Gmet_2928 cytochrome c family protein.
  
 
 0.428
Ppro_1860
PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cte:CT1150 nitroreductase family protein.
  
 
 0.428
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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