STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1978PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: pca:Pcar_2856 hypothetical protein. (174 aa)    
Predicted Functional Partners:
Ppro_1977
KEGG: pca:Pcar_2857 hypothetical protein.
 
    0.957
Ppro_1979
KEGG: sat:SYN_01583 hypothetical protein.
 
     0.802
Ppro_1708
KEGG: dps:DP0968 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.764
Ppro_1980
PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: psp:PSPPH_1477 cytosine deaminase.
       0.727
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
   
    0.703
Ppro_0122
PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: gsu:GSU2324 hypothetical protein.
  
   
 0.531
Ppro_0729
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; KEGG: gme:Gmet_0147 ferredoxin-dependent glutamate synthase.
  
   
 0.523
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.