STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2000KEGG: pca:Pcar_2846 conserved hypothetical protein; putative signal peptide. (291 aa)    
Predicted Functional Partners:
Ppro_1007
KEGG: gme:Gmet_1436 hypothetical protein.
  
     0.740
Ppro_1218
KEGG: pca:Pcar_0459 hypothetical protein.
  
     0.737
Ppro_3142
PFAM: Roadblock/LC7 family protein; KEGG: pca:Pcar_2475 hypothetical protein.
  
     0.712
Ppro_1010
KEGG: gme:Gmet_1436 hypothetical protein.
  
     0.676
Ppro_3232
PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: mlo:mll2060 outer membrane protein.
 
     0.661
Ppro_1205
KEGG: pfl:PFL_2070 hypothetical protein.
  
     0.652
Ppro_1208
PFAM: extracellular solute-binding protein, family 1; KEGG: pca:Pcar_0492 spermidine/putrescine-binding periplasmic protein-like.
  
     0.608
Ppro_0717
Histidine kinase; PFAM: GCN5-related N-acetyltransferase; ATP-binding region, ATPase domain protein domain protein; KEGG: pca:Pcar_1990 signal transduction histidine kinase regulating C4-dicarboxylate transport system-like.
  
     0.606
Ppro_2165
KEGG: pca:Pcar_0627 hypothetical protein.
  
     0.573
Ppro_2742
PFAM: Mur ligase, middle domain protein; KEGG: pca:Pcar_0169 UDP-N-acetylmuramyl pentapeptide synthase-like.
  
     0.561
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.