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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2007Trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; KEGG: gme:Gmet_2455 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. (322 aa)    
Predicted Functional Partners:
Ppro_2048
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.961
Ppro_2404
Farnesyl-diphosphate synthase; PFAM: Polyprenyl synthetase; KEGG: gsu:GSU1765 geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
  
0.923
Ppro_0290
TIGRFAM: 4-hydroxybenzoate polyprenyltransferase, putative; PFAM: UbiA prenyltransferase; KEGG: gsu:GSU0439 4-hydroxybenzoate octaprenyltransferase, putative; Belongs to the UbiA prenyltransferase family.
 
 
 0.893
rnj
Beta-lactamase domain protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
  
    0.730
Ppro_2006
PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: gme:Gmet_2452 thioredoxin family protein.
     
 0.702
Ppro_2005
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: gme:Gmet_2451 cytochrome c biogenesis protein, transmembrane region.
       0.663
Ppro_2004
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gsu:GSU1323 hypothetical protein.
  
    0.654
xseB
Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
  
 0.613
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
 
  
 0.593
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.578
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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