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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2008KEGG: gsu:GSU1638 hypothetical protein. (226 aa)    
Predicted Functional Partners:
Ppro_2009
Inhibitor of MCP methylation-like protein; KEGG: gsu:GSU2059 hypothetical protein.
 
     0.819
Ppro_0024
TIGRFAM: MJ0042 family finger-like protein; KEGG: gme:Gmet_1032 zinc finger/thioredoxin putative.
  
     0.721
Ppro_0521
KEGG: gsu:GSU3304 LamB porin family protein, putative.
  
     0.698
Ppro_3318
KEGG: gsu:GSU1131 hypothetical protein.
  
     0.677
Ppro_1884
KEGG: gsu:GSU2154 hypothetical protein.
  
     0.670
Ppro_0203
KEGG: gsu:GSU2154 hypothetical protein.
  
     0.647
Ppro_0209
KEGG: gsu:GSU2160 hypothetical protein.
  
 
   0.645
Ppro_2419
KEGG: gsu:GSU1782 putative type IV pilus assembly protein PilM.
  
     0.643
Ppro_0271
PFAM: TrfA family protein; KEGG: gsu:GSU2175 TrfA-related protein.
 
     0.642
Ppro_0210
PFAM: von Willebrand factor, type A; KEGG: gsu:GSU2161 hypothetical protein.
  
     0.615
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.