STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2014PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gsu:GSU1434 peptide ABC transporter, permease protein. (325 aa)    
Predicted Functional Partners:
Ppro_2013
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gme:Gmet_1236 binding-protein-dependent transport systems inner membrane component.
 
 0.999
Ppro_2655
PFAM: extracellular solute-binding protein, family 5; KEGG: gme:Gmet_1234 extracellular solute-binding protein, family 5.
 0.997
Ppro_2184
KEGG: gsu:GSU2623 peptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 0.996
Ppro_2185
KEGG: gme:Gmet_0847 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 0.996
Ppro_1540
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pca:Pcar_2396 ABC transporter, ATP-binding protein, putative.
 
  
 0.864
Ppro_2012
Deoxyribodipyrimidine photo-lyase type II; KEGG: gsu:GSU2829 deoxyribodipyrimidine photolyase, putative; TIGRFAM: deoxyribodipyrimidine photolyase; PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein.
       0.774
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.707
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.496
Ppro_2016
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
     
 0.488
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
      0.418
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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