STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2115PFAM: peptidase M29, aminopeptidase II; KEGG: gme:Gmet_1594 peptidase M29, aminopeptidase II. (367 aa)    
Predicted Functional Partners:
Ppro_2114
KEGG: gme:Gmet_1237 hypothetical protein.
       0.768
Ppro_2112
TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; HDOD; KEGG: gsu:GSU0294 HD domain protein.
       0.751
Ppro_2113
PFAM: protein of unknown function DUF815; KEGG: gme:Gmet_1239 protein of unknown function DUF815.
       0.751
Ppro_2109
PFAM: ABC-2 type transporter; KEGG: gsu:GSU1504 ABC transporter, permease protein, ABC-2 family.
       0.630
Ppro_2110
PFAM: glycosyl transferase, family 2; KEGG: gsu:GSU1503 glycosyl transferase, group 2 family protein.
       0.630
Ppro_2111
PFAM: UbiA prenyltransferase; KEGG: gsu:GSU1502 hypothetical protein.
       0.630
Ppro_3281
KEGG: gme:Gmet_3024 hypothetical protein.
  
     0.403
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.