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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2140Hypothetical protein. (105 aa)    
Predicted Functional Partners:
Ppro_2137
PFAM: ABC-3 protein; KEGG: gme:Gmet_0493 ABC-3.
       0.773
Ppro_2138
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_0492 ABC transporter-related protein.
       0.773
Ppro_2139
PFAM: periplasmic solute binding protein; KEGG: gme:Gmet_0491 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
       0.773
Ppro_2141
PFAM: protein of unknown function UPF0005; KEGG: pca:Pcar_0302 hypothetical protein; Belongs to the BI1 family.
       0.565
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.