STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2425PFAM: protein of unknown function DUF58; KEGG: gme:Gmet_1633 protein of unknown function DUF58. (276 aa)    
Predicted Functional Partners:
Ppro_2424
PFAM: transglutaminase domain protein; KEGG: gme:Gmet_1634 transglutaminase-like.
 
  
 0.962
Ppro_2426
PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: gsu:GSU1696 MoxR family protein.
 
  
 0.874
Ppro_0821
PFAM: transglutaminase domain protein; KEGG: mfa:Mfla_1839 transglutaminase-like protein.
 
  
 0.826
Ppro_0819
PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: cvi:CV3685 probable MoxR like protein.
 
  
 0.632
Ppro_1215
PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: pca:Pcar_0462 putative Mg chelatase.
 
  
 0.477
Ppro_0994
PFAM: Pilus assembly protein, PilO; KEGG: gsu:GSU2030 type IV pilus biogenesis protein PilO.
 
     0.457
Ppro_2030
Response regulator receiver protein; KEGG: gsu:GSU0231 hypothetical protein.
  
     0.451
Ppro_0530
PFAM: Peptidoglycan-binding LysM; KEGG: gsu:GSU2551 LysM domain protein.
  
     0.450
Ppro_2423
PFAM: GPR1/FUN34/yaaH family protein; KEGG: mbu:Mbur_0755 GPR1/FUN34/YaaH.
       0.430
Ppro_0658
KEGG: gme:Gmet_1983 hypothetical protein.
  
     0.420
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.