STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2448Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (84 aa)    
Predicted Functional Partners:
Ppro_2447
TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin, Txe/YoeB; KEGG: eba:ebA1543 hypothetical protein.
 
 
 0.995
Ppro_2449
PFAM: protein of unknown function UPF0150; KEGG: noc:Noc_2743 hypothetical protein.
     
 0.485
Ppro_2446
PFAM: protein of unknown function DUF218.
       0.478
Ppro_1113
KEGG: sat:SYN_03526 hypothetical cytosolic protein.
   
 
 0.447
Ppro_2135
KEGG: sat:SYN_03526 hypothetical cytosolic protein.
   
 
 0.447
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.