STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2467PFAM: glycosyl transferase, family 2; KEGG: pfo:Pfl_2017 glycosyl transferase, family 2. (322 aa)    
Predicted Functional Partners:
Ppro_2468
KEGG: nmu:Nmul_A2522 glycosyl transferase, group 1.
 
    0.820
Ppro_2465
Hypothetical protein.
 
    0.791
Ppro_2470
PFAM: polysaccharide deacetylase; KEGG: dvu:DVUA0043 polysaccharide deacetylase family protein.
 
  
 0.750
Ppro_2469
KEGG: dvu:DVUA0044 hypothetical protein.
 
     0.741
Ppro_2466
TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: dar:Daro_2408 asparagine synthase, glutamine-hydrolyzing.
  
    0.712
Ppro_2471
KEGG: gsu:GSU1981 hypothetical protein.
       0.697
Ppro_1420
PFAM: glycosyl transferase, family 2; KEGG: lic:LIC12128 glycosyl transferase.
  
     0.609
Ppro_2473
KEGG: gme:Gmet_2028 polysaccharide biosynthesis protein, putative.
 
  
 0.594
Ppro_2476
PFAM: sugar transferase; KEGG: gsu:GSU1986 glycosyl transferase domain protein.
 
  
 0.591
Ppro_2472
SMART: AAA ATPase; KEGG: gsu:GSU1982 general secretion pathway protein-related protein.
       0.510
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.