STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2500PFAM: transposase, IS4 family protein; KEGG: bha:BH0691 transposase (15). (351 aa)    
Predicted Functional Partners:
Ppro_2289
KEGG: pol:Bpro_5024 ATPase-like protein.
  
  
 0.640
Ppro_2288
KEGG: mag:amb2044 type II restriction enzyme.
  
  
 0.639
Ppro_2283
KEGG: mag:amb2047 predicted ATP-dependent Lon-type protease.
  
  
 0.613
Ppro_0929
Hypothetical protein.
  
     0.569
Ppro_1007
KEGG: gme:Gmet_1436 hypothetical protein.
  
    0.519
Ppro_2291
KEGG: eba:ebA5220 hypothetical protein.
  
  
 0.517
Ppro_2501
Hypothetical protein.
       0.422
Ppro_1286
KEGG: gme:Gmet_1620 HDIG.
  
     0.417
Ppro_0906
KEGG: pca:Pcar_2665 hypothetical protein.
  
     0.404
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.