STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2590PFAM: chemotaxis sensory transducer; KEGG: psp:PSPPH_5083 methyl-accepting chemotaxis protein. (675 aa)    
Predicted Functional Partners:
Ppro_1583
PFAM: response regulator receiver; CheW domain protein; KEGG: gsu:GSU0879 chemotaxis protein CheV.
 
 
 0.915
Ppro_0877
CheA signal transduction histidine kinases; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: gsu:GSU0296 chemotaxis protein CheA, putative.
 
 
 0.902
Ppro_2364
PFAM: response regulator receiver; CheW domain protein; KEGG: vvy:VV0958 chemotaxis signal transduction protein.
 
 
 0.898
Ppro_3091
CheA signal transduction histidine kinases; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: gsu:GSU3199 chemotaxis protein CheA.
 
 
 0.862
Ppro_1729
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: gsu:GSU2222 chemotaxis protein CheA.
 
 
 0.861
Ppro_1607
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: gme:Gmet_2427 CheA signal transduction histidine kinase.
 
 
 0.844
Ppro_3106
PFAM: CheW domain protein; KEGG: gsu:GSU0297 purine-binding chemotaxis protein CheW.
 
   0.826
Ppro_0876
PFAM: CheW domain protein; KEGG: gsu:GSU0297 purine-binding chemotaxis protein CheW.
 
   0.823
Ppro_1730
PFAM: CheW domain protein; KEGG: gme:Gmet_2309 CheW protein.
 
   0.814
Ppro_0902
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: gsu:GSU1927 sensory box/response regulator.
 
 0.796
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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