STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2712Hypothetical protein; KEGG: gme:Gmet_2429 anti-sigma-factor antagonist (STAS) domain protein. (130 aa)    
Predicted Functional Partners:
Ppro_1622
KEGG: gme:Gmet_2115 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein.
  
 
 0.828
Ppro_0903
Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: dar:Daro_3350 response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal:Hpt.
  
  
 0.786
Ppro_2659
Serine phosphatase; PFAM: Na+/solute symporter; GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: gme:Gmet_1230 serine phosphatase.
  
 
 0.782
Ppro_2711
PFAM: MCP methyltransferase, CheR-type; KEGG: mhu:Mhun_0124 MCP methyltransferase, CheR-type.
       0.778
Ppro_1342
Multi-sensor hybrid histidine kinase; KEGG: dar:Daro_3006 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
  
 0.776
Ppro_0561
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU0816 ABC transporter, ATP-binding protein.
   
   0.749
Ppro_3213
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_2542 ABC transporter-related protein.
   
   0.749
Ppro_0560
PFAM: Mammalian cell entry related domain protein; KEGG: gme:Gmet_0786 mammalian cell entry-related protein.
  
   0.748
Ppro_3214
PFAM: Mammalian cell entry related domain protein; KEGG: gme:Gmet_2541 mammalian cell entry-related protein.
  
   0.748
Ppro_0562
PFAM: protein of unknown function DUF140; KEGG: gsu:GSU0817 putative ABC transport system permease protein.
   
   0.743
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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