STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2774PFAM: Nucleotidyl transferase; KEGG: nmu:Nmul_A0425 nucleotidyl transferase. (262 aa)    
Predicted Functional Partners:
Ppro_2771
PFAM: histidine triad (HIT) protein; KEGG: neu:NE0176 hypothetical protein.
 
     0.946
Ppro_2772
KEGG: nmu:Nmul_A0401 hypothetical protein.
 
     0.934
Ppro_2773
KEGG: nmu:Nmul_A0400 hypothetical protein.
 
     0.918
Ppro_2770
PFAM: AMP-dependent synthetase and ligase; KEGG: gox:GOX2058 acyl-CoA synthase.
 
     0.888
Ppro_2769
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KR; KEGG: nmu:Nmul_A0230 NAD-dependent epimerase/dehydratase.
 
     0.886
Ppro_2768
PFAM: phosphopantetheine-binding; KEGG: nmu:Nmul_A0229 phosphopantetheine-binding.
 
     0.874
Ppro_2746
KEGG: neu:NE0803 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.803
Ppro_2748
KEGG: neu:NE0805 hypothetical protein.
 
     0.771
Ppro_2747
PFAM: diacylglycerol kinase, catalytic region; KEGG: nmu:Nmul_A0405 diacylglycerol kinase, catalytic region.
 
     0.760
flgK
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: gme:Gmet_0438 flagellar hook-associated protein.
  
    0.723
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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