Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ppro_2811Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: dar:Daro_3308 ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal. (829 aa)    
Predicted Functional Partners:
Ppro_0713
PFAM: response regulator receiver; KEGG: gsu:GSU2046 response regulator.
 
 
 0.784
Ppro_2062
PFAM: response regulator receiver; KEGG: mag:amb4144 response regulator containing a CheY-like receiver domain and an HD-GYP domain.
     0.764
Ppro_0507
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gsu:GSU1879 DNA-binding response regulator.
 
 
 0.759
Ppro_3419
PFAM: response regulator receiver; KEGG: gsu:GSU0403 chemotaxis protein CheY.
  
 
 
 0.744
Ppro_0435
PFAM: response regulator receiver; KEGG: gme:Gmet_2679 response regulator receiver domain protein (CheY-like).
  
 
 0.743
Ppro_2813
PFAM: response regulator receiver; General secretory system II, protein E domain protein; KEGG: gme:Gmet_1737 response regulator receiver domain protein (CheY-like).
 
     0.730
Ppro_3155
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gme:Gmet_2693 two component transcriptional regulator, winged helix family.
 
 
 0.710
Ppro_3480
PFAM: response regulator receiver; KEGG: gsu:GSU1891 response regulator.
  
 
   0.683
Ppro_2228
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gsu:GSU3118 DNA-binding response regulator.
 
 
 0.660
Ppro_2957
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pca:Pcar_3081 response regulator receiver domain protein (CheY-like).
 
 
 0.653
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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