STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2937Diguanylate phosphodiesterase; PFAM: EAL domain protein; HDOD; KEGG: gsu:GSU1149 EAL domain protein. (411 aa)    
Predicted Functional Partners:
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.773
Ppro_2936
PFAM: Class I peptide chain release factor; KEGG: gsu:GSU0546 peptidyl-tRNA hydrolase domain protein.
       0.773
Ppro_2933
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gme:Gmet_0937 HAD-superfamily hydrolase, subfamily IA, variant 1.
       0.689
Ppro_2934
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: gme:Gmet_0936 HNH endonuclease.
       0.689
Ppro_2932
Hypothetical protein.
       0.543
Ppro_2938
PFAM: phospholipid/glycerol acyltransferase; KEGG: gme:Gmet_0934 phospholipid/glycerol acyltransferase.
       0.487
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.487
Ppro_3416
KEGG: nmu:Nmul_A1342 hypothetical protein.
  
     0.430
Ppro_1583
PFAM: response regulator receiver; CheW domain protein; KEGG: gsu:GSU0879 chemotaxis protein CheV.
 
     0.415
Ppro_2112
TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; HDOD; KEGG: gsu:GSU0294 HD domain protein.
  
     0.403
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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