STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_3114PFAM: protein of unknown function DUF533; KEGG: ret:RHE_CH03634 hypothetical protein. (207 aa)    
Predicted Functional Partners:
Ppro_3113
PFAM: protein of unknown function DUF124; KEGG: xoo:XOO4517 hypothetical protein.
       0.603
Ppro_0125
KEGG: gsu:GSU2330 hypothetical protein.
  
     0.503
htpX
Heat shock protein, Metallo peptidase, MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: gsu:GSU1567 peptidase, M48 family; Belongs to the peptidase M48B family.
   
    0.469
htpX-2
Heat shock protein, Metallo peptidase, MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: gsu:GSU1567 peptidase, M48 family; Belongs to the peptidase M48B family.
   
    0.469
Ppro_3115
KEGG: pca:Pcar_3034 hypothetical protein.
       0.436
Ppro_0233
Hypothetical protein.
  
     0.432
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.