STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_3232PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: mlo:mll2060 outer membrane protein. (230 aa)    
Predicted Functional Partners:
Ppro_0476
PFAM: outer membrane chaperone Skp (OmpH); KEGG: gme:Gmet_1649 outer membrane chaperone Skp (OmpH).
    
 
 0.744
Ppro_3018
PFAM: outer membrane chaperone Skp (OmpH); KEGG: gsu:GSU2267 outer membrane protein, putative.
    
 
 0.744
Ppro_1199
Respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (NrfH) precursor; KEGG: gme:Gmet_0295 cytochrome c nitrite reductase, small subunit NrfH, putative.
  
 
 0.742
Ppro_1575
KEGG: gme:Gmet_2301 cytochrome c family protein.
  
 
 0.736
Ppro_1577
KEGG: gme:Gmet_2928 cytochrome c family protein.
  
 
 0.736
Ppro_1218
KEGG: pca:Pcar_0459 hypothetical protein.
  
     0.733
Ppro_2000
KEGG: pca:Pcar_2846 conserved hypothetical protein; putative signal peptide.
 
     0.661
Ppro_3142
PFAM: Roadblock/LC7 family protein; KEGG: pca:Pcar_2475 hypothetical protein.
  
     0.659
Ppro_1208
PFAM: extracellular solute-binding protein, family 1; KEGG: pca:Pcar_0492 spermidine/putrescine-binding periplasmic protein-like.
 
   
 0.638
Ppro_2745
PFAM: metallophosphoesterase; KEGG: nha:Nham_3261 metallophosphoesterase.
  
     0.587
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.