STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_3263Trehalose synthase; KEGG: gsu:GSU2361 alpha amylase family protein; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain. (1121 aa)    
Predicted Functional Partners:
Ppro_3267
TIGRFAM: malto-oligosyltrehalose synthase; SMART: alpha amylase, catalytic sub domain; KEGG: gsu:GSU2360 maltooligosyltrehalose synthase, putative.
 
 
 0.997
Ppro_3269
KEGG: gme:Gmet_3467 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.
 
 
0.996
Ppro_0419
Isoamylase; KEGG: aba:Acid345_3295 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
 
 
0.993
Ppro_3264
4-alpha-glucanotransferase; KEGG: gme:Gmet_2391 glycoside hydrolase, family 77; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77.
  
 
 0.991
Ppro_3270
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 0.979
Ppro_3415
KEGG: gsu:GSU0371 carbohydrate phosphorylase family protein; TIGRFAM: alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35.
 
 0.977
Ppro_3271
Trehalose 6-phosphate synthase; PFAM: glycosyl transferase, family 20; KEGG: rfr:Rfer_2163 alpha,alpha-trehalose-phosphate synthase (UDP-forming).
 
 
 0.975
Ppro_0415
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.972
Ppro_2240
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.972
Ppro_1738
4-alpha-glucanotransferase; KEGG: gme:Gmet_2391 glycoside hydrolase, family 77; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77.
 
 
 0.969
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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