STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_3364PFAM: amidohydrolase 2; KEGG: gme:Gmet_0087 amidohydrolase 2. (339 aa)    
Predicted Functional Partners:
Ppro_3365
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: pca:Pcar_2776 2-acyl-glycerophospho-ethanolamine acyltransferase.
 
 
 0.915
Ppro_3370
KEGG: gme:Gmet_0084 hypothetical protein.
 
     0.842
Ppro_3366
PFAM: glutaredoxin; KEGG: gme:Gmet_2959 glutaredoxin-like protein, YruB.
       0.741
Ppro_3367
KEGG: ade:Adeh_3999 hypothetical protein.
       0.716
Ppro_0495
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gme:Gmet_3083 HAD-superfamily hydrolase, subfamily IA, variant 1.
  
    0.589
Ppro_3498
Hypothetical protein; KEGG: chy:CHY_0218 doubled CXXCH domain protein.
  
     0.580
Ppro_1470
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: tdn:Tmden_1547 TonB-dependent receptor, plug.
  
     0.568
Ppro_3543
Hypothetical protein.
  
     0.556
Ppro_2684
KEGG: gme:Gmet_1484 hypothetical protein.
  
     0.516
Ppro_0201
KEGG: gsu:GSU2152 hypothetical protein.
  
     0.515
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.