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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_3575PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gme:Gmet_0761 4Fe-4S ferredoxin, iron-sulfur binding protein. (367 aa)    
Predicted Functional Partners:
Ppro_3096
Protein of unknown function DUF362; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF362; KEGG: gme:Gmet_3040 hypothetical protein.
 
     0.585
Ppro_3574
Hypothetical protein.
       0.578
Ppro_0777
PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dvu:DVU1220 nitroreductase family protein.
 
  
 0.557
hcp-2
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
       0.532
Ppro_0626
PFAM: protein of unknown function DUF111; KEGG: gme:Gmet_0194 hypothetical protein; Belongs to the LarC family.
 
    0.509
Ppro_2213
PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: gsu:GSU0772 NADPH-dependent FMN reductase domain protein.
 
     0.504
Ppro_1049
KEGG: chy:CHY_1281 conserved hypothetical protein TIGR00268.
 
    0.412
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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