Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rfer_0199Iron-sulfur cluster binding protein. (477 aa)    
Predicted Functional Partners:
Rfer_0201
Protein of unknown function DUF224, cysteine-rich protein.
 
 0.998
Rfer_0200
Protein of unknown function DUF162.
 
 
 0.997
Rfer_1288
FAD linked oxidase-like.
  
 
 0.828
Rfer_0481
Protein of unknown function DUF224, cysteine-rich protein.
 
 
 0.800
Rfer_2374
Putative ferredoxin.
 
 
 0.775
Rfer_0202
Transcriptional regulator, GntR family.
 
   
 0.680
Rfer_3208
Glutamate synthase (NADPH) small chain; Sulfide dehydrogenase (flavoprotein) subunit SudB / sulfide dehydrogenase (flavoprotein) subunit SudA.
  
 
 0.577
Rfer_3299
Oxidoreductase FAD/NAD(P)-binding.
  
   0.501
Rfer_3264
4Fe-4S ferredoxin, iron-sulfur binding.
  
 
 0.488
Rfer_3209
Pyruvate flavodoxin/ferredoxin oxidoreductase-like.
     
 0.478
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.