STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rfer_0484Glutathione peroxidase; Belongs to the glutathione peroxidase family. (161 aa)    
Predicted Functional Partners:
Rfer_3785
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.950
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
    
 0.937
Rfer_3386
Gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03.
    
 0.928
Rfer_1089
Glutathione S-transferase-like.
  
 
 0.921
Rfer_3730
Glutathione S-transferase-like.
   
 
 0.921
Rfer_0047
Glutathione S-transferase-like; Belongs to the GST superfamily.
   
 
 0.919
Rfer_4050
Glutathione S-transferase-like.
   
 
 0.912
Rfer_3112
Putative glutathione S-transferase P subunit.
   
 
 0.911
Rfer_3267
Glutathione S-transferase-like.
   
 
 0.908
Rfer_3151
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.744
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.