STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rfer_0499Hypothetical protein. (245 aa)    
Predicted Functional Partners:
Rfer_0497
Oxidoreductase FAD/NAD(P)-binding.
 
   
 0.868
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
  
 0.866
Rfer_2145
AMP-dependent synthetase and ligase.
  
 
 0.865
Rfer_3270
NADH dehydrogenase (quinone).
   
   0.837
Rfer_3858
Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit.
   
   0.837
Rfer_0498
Hypothetical protein.
       0.792
Rfer_0832
Heat shock protein 70.
  
 0.783
Rfer_1948
Molecular chaperone, Hsp70 class.
  
 0.783
dnaK
Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.783
hscA
Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
  
 0.783
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.