Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rfer_0505Diacylglycerol O-acyltransferase. (467 aa)    
Predicted Functional Partners:
Rfer_3526
Male sterility-like.
 
  
 0.977
Rfer_3531
Diacylglycerol O-acyltransferase.
  
  
0.932
Rfer_1475
Diacylglycerol O-acyltransferase.
  
  
 
0.927
Rfer_3358
Triacylglycerol lipase.
   
 
 0.905
Rfer_4206
Saccharopine dehydrogenase.
  
     0.742
Rfer_3545
PGAP1-like.
  
  
 0.740
Rfer_1474
Conserved hypothetical protein.
 
   
 0.712
Rfer_0323
Alpha/beta hydrolase.
 
 
 
 0.703
Rfer_3848
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.649
Rfer_2371
Alpha/beta hydrolase.
  
     0.602
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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