STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rfer_0768Conserved hypothetical protein. (287 aa)    
Predicted Functional Partners:
Rfer_0769
Glycosyl transferase, family 39.
 
  
 0.905
Rfer_0771
Glycosyl transferase, family 2.
 
  
 0.847
Rfer_0770
GtrA-like protein.
 
     0.815
Rfer_0767
Propionate CoA-transferase.
       0.664
Rfer_3168
Transcriptional regulator, Crp/Fnr family.
  
     0.522
Rfer_0766
Glutamine amidotransferase, class-II.
       0.484
Rfer_2901
Putative inner membrane transmembrane protein.
  
  
 0.425
Rfer_3997
Glycosyl transferase, family 2.
  
  
 0.413
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.