Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Rfer_1007Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (276 aa)    
Predicted Functional Partners:
Rfer_2272
3-hydroxyacyl-CoA dehydrogenase.
 0.855
Rfer_0324
Enoyl-CoA hydratase/isomerase.
 
   0.852
Rfer_1008
2-nitropropane dioxygenase, NPD.
  
  
 0.788
Rfer_0224
3-hydroxyacyl-CoA dehydrogenase.
 0.782
Rfer_1000
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.686
Rfer_1019
acyl-CoA dehydrogenase-like.
  
 0.618
Rfer_1768
Multi-sensor hybrid histidine kinase.
  
 0.614
Rfer_4207
acyl-CoA dehydrogenase-like.
 
 0.608
Rfer_0226
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.607
Rfer_0272
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.607
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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