Rfer_1202 protein (Rhodoferax ferrireducens)

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Score

Rfer_1202

UvrD/REP helicase. (1112 aa)

Predicted Functional Partners:

recA

0.855

Rfer_2572

0.823

Rfer_1204

0.785

Rfer_3955

0.780

Rfer_1203

0.773

Rfer_0002

0.700

polA

0.674

Rfer_3931

0.626

Rfer_3042

0.621

Rfer_2278

0.608

Your Current Organism:

Rhodoferax ferrireducens

NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Rfer_0002	Rfer_1202	Rfer_0002	Rfer_1202	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	UvrD/REP helicase.	0.700
Rfer_0002	Rfer_2572	Rfer_0002	Rfer_2572	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA polymerase III, epsilon subunit.	0.978
Rfer_0002	Rfer_3042	Rfer_0002	Rfer_3042	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Putative GTP-binding protein.	0.577
Rfer_0002	Rfer_3931	Rfer_0002	Rfer_3931	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	SNF2-related.	0.914
Rfer_0002	Rfer_3955	Rfer_0002	Rfer_3955	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA topoisomerase III.	0.726
Rfer_0002	polA	Rfer_0002	Rfer_1325	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.979
Rfer_0002	recA	Rfer_0002	Rfer_3948	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.944
Rfer_1202	Rfer_0002	Rfer_1202	Rfer_0002	UvrD/REP helicase.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.700
Rfer_1202	Rfer_1203	Rfer_1202	Rfer_1203	UvrD/REP helicase.	Hypothetical protein.	0.773
Rfer_1202	Rfer_1204	Rfer_1202	Rfer_1204	UvrD/REP helicase.	Sigma-24 (FecI-like).	0.785
Rfer_1202	Rfer_2278	Rfer_1202	Rfer_2278	UvrD/REP helicase.	Transcriptional regulator, MerR family.	0.608
Rfer_1202	Rfer_2572	Rfer_1202	Rfer_2572	UvrD/REP helicase.	DNA polymerase III, epsilon subunit.	0.823
Rfer_1202	Rfer_3042	Rfer_1202	Rfer_3042	UvrD/REP helicase.	Putative GTP-binding protein.	0.621
Rfer_1202	Rfer_3931	Rfer_1202	Rfer_3931	UvrD/REP helicase.	SNF2-related.	0.626
Rfer_1202	Rfer_3955	Rfer_1202	Rfer_3955	UvrD/REP helicase.	DNA topoisomerase III.	0.780
Rfer_1202	polA	Rfer_1202	Rfer_1325	UvrD/REP helicase.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.674
Rfer_1202	recA	Rfer_1202	Rfer_3948	UvrD/REP helicase.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.855
Rfer_1203	Rfer_1202	Rfer_1203	Rfer_1202	Hypothetical protein.	UvrD/REP helicase.	0.773
Rfer_1203	Rfer_1204	Rfer_1203	Rfer_1204	Hypothetical protein.	Sigma-24 (FecI-like).	0.773
Rfer_1204	Rfer_1202	Rfer_1204	Rfer_1202	Sigma-24 (FecI-like).	UvrD/REP helicase.	0.785

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