Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Rfer_0556 | Rfer_1304 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Cobyrinic acid a,c-diamide synthase. | 0.478 |
| Rfer_0556 | Rfer_1306 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Nuclease (SNase-like). | 0.481 |
| Rfer_0589 | Rfer_1306 | Acyltransferase 3. | Nuclease (SNase-like). | 0.442 |
| Rfer_0685 | Rfer_1306 | Acyltransferase 3. | Nuclease (SNase-like). | 0.442 |
| Rfer_1304 | Rfer_0556 | Cobyrinic acid a,c-diamide synthase. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.478 |
| Rfer_1304 | Rfer_1305 | Cobyrinic acid a,c-diamide synthase. | Diguanylate cyclase. | 0.860 |
| Rfer_1304 | Rfer_1306 | Cobyrinic acid a,c-diamide synthase. | Nuclease (SNase-like). | 0.525 |
| Rfer_1305 | Rfer_1304 | Diguanylate cyclase. | Cobyrinic acid a,c-diamide synthase. | 0.860 |
| Rfer_1305 | Rfer_1306 | Diguanylate cyclase. | Nuclease (SNase-like). | 0.554 |
| Rfer_1306 | Rfer_0556 | Nuclease (SNase-like). | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.481 |
| Rfer_1306 | Rfer_0589 | Nuclease (SNase-like). | Acyltransferase 3. | 0.442 |
| Rfer_1306 | Rfer_0685 | Nuclease (SNase-like). | Acyltransferase 3. | 0.442 |
| Rfer_1306 | Rfer_1304 | Nuclease (SNase-like). | Cobyrinic acid a,c-diamide synthase. | 0.525 |
| Rfer_1306 | Rfer_1305 | Nuclease (SNase-like). | Diguanylate cyclase. | 0.554 |
| Rfer_1306 | Rfer_2145 | Nuclease (SNase-like). | AMP-dependent synthetase and ligase. | 0.409 |
| Rfer_1306 | Rfer_2259 | Nuclease (SNase-like). | Ankyrin. | 0.406 |
| Rfer_1306 | Rfer_2666 | Nuclease (SNase-like). | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.474 |
| Rfer_1306 | Rfer_2933 | Nuclease (SNase-like). | Glutamate synthase (NADH) large subunit. | 0.525 |
| Rfer_1306 | Rfer_4244 | Nuclease (SNase-like). | Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.732 |
| Rfer_2145 | Rfer_1306 | AMP-dependent synthetase and ligase. | Nuclease (SNase-like). | 0.409 |
page 1 of 2