STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuBABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (278 aa)    
Predicted Functional Partners:
Rfer_1776
Binding-protein-dependent transport systems inner membrane component.
 
 0.994
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 
 0.991
Rfer_1778
ABC transporter, substrate-binding protein, aliphatic sulphonates.
 
 0.991
Rfer_1779
ABC transporter, substrate-binding protein, aliphatic sulphonates.
 
 0.991
Rfer_1780
NADPH-dependent FMN reductase.
 
 
 0.984
Rfer_1773
Putative nitrilotriacetate monooxygenase component A protein.
 
  
 0.821
Rfer_1774
Molybdenum-pterin binding domain.
 
  
 0.780
Rfer_3114
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.747
Rfer_2746
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.726
Rfer_2555
Nitrate transport permease.
 
  
 0.711
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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