Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rfer_1965Iron-containing alcohol dehydrogenase. (419 aa)    
Predicted Functional Partners:
Rfer_2439
Alcohol dehydrogenase, zinc-binding.
  
 
 0.713
Rfer_0121
Alcohol dehydrogenase, zinc-binding; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 
 0.635
Rfer_3209
Pyruvate flavodoxin/ferredoxin oxidoreductase-like.
  
  
 0.614
Rfer_0370
Ribonucleoside-triphosphate reductase, anaerobic-like.
 
  
 0.529
glgA
Glycogen/starch synthases, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.511
Rfer_1964
Putative dehydrogenase.
       0.504
Rfer_1966
Hypothetical protein.
       0.491
Rfer_2881
Hypothetical protein.
   
    0.469
Rfer_0396
Radical SAM.
  
  
 0.463
Rfer_2933
Glutamate synthase (NADH) large subunit.
   
  
 0.450
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.