Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rfer_0142 | Rfer_0184 | Rfer_0142 | Rfer_0184 | Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. | Phosphonate-binding periplasmic protein. | 0.967 |
| Rfer_0142 | Rfer_2020 | Rfer_0142 | Rfer_2020 | Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. | Twin-arginine translocation pathway signal. | 0.459 |
| Rfer_0142 | phnC2 | Rfer_0142 | Rfer_1616 | Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. | ABC transporter related; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.727 |
| Rfer_0184 | Rfer_0142 | Rfer_0184 | Rfer_0142 | Phosphonate-binding periplasmic protein. | Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. | 0.967 |
| Rfer_0184 | Rfer_2020 | Rfer_0184 | Rfer_2020 | Phosphonate-binding periplasmic protein. | Twin-arginine translocation pathway signal. | 0.534 |
| Rfer_0184 | phnC2 | Rfer_0184 | Rfer_1616 | Phosphonate-binding periplasmic protein. | ABC transporter related; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.983 |
| Rfer_1326 | Rfer_2020 | Rfer_1326 | Rfer_2020 | Alkaline phosphatase. | Twin-arginine translocation pathway signal. | 0.446 |
| Rfer_2019 | Rfer_2020 | Rfer_2019 | Rfer_2020 | Conserved hypothetical protein. | Twin-arginine translocation pathway signal. | 0.488 |
| Rfer_2019 | Rfer_2021 | Rfer_2019 | Rfer_2021 | Conserved hypothetical protein. | Lyso-ornithine lipid acyltransferase. | 0.452 |
| Rfer_2020 | Rfer_0142 | Rfer_2020 | Rfer_0142 | Twin-arginine translocation pathway signal. | Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. | 0.459 |
| Rfer_2020 | Rfer_0184 | Rfer_2020 | Rfer_0184 | Twin-arginine translocation pathway signal. | Phosphonate-binding periplasmic protein. | 0.534 |
| Rfer_2020 | Rfer_1326 | Rfer_2020 | Rfer_1326 | Twin-arginine translocation pathway signal. | Alkaline phosphatase. | 0.446 |
| Rfer_2020 | Rfer_2019 | Rfer_2020 | Rfer_2019 | Twin-arginine translocation pathway signal. | Conserved hypothetical protein. | 0.488 |
| Rfer_2020 | Rfer_2021 | Rfer_2020 | Rfer_2021 | Twin-arginine translocation pathway signal. | Lyso-ornithine lipid acyltransferase. | 0.735 |
| Rfer_2020 | phnC2 | Rfer_2020 | Rfer_1616 | Twin-arginine translocation pathway signal. | ABC transporter related; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.402 |
| Rfer_2021 | Rfer_2019 | Rfer_2021 | Rfer_2019 | Lyso-ornithine lipid acyltransferase. | Conserved hypothetical protein. | 0.452 |
| Rfer_2021 | Rfer_2020 | Rfer_2021 | Rfer_2020 | Lyso-ornithine lipid acyltransferase. | Twin-arginine translocation pathway signal. | 0.735 |
| phnC2 | Rfer_0142 | Rfer_1616 | Rfer_0142 | ABC transporter related; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. | 0.727 |
| phnC2 | Rfer_0184 | Rfer_1616 | Rfer_0184 | ABC transporter related; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | Phosphonate-binding periplasmic protein. | 0.983 |
| phnC2 | Rfer_2020 | Rfer_1616 | Rfer_2020 | ABC transporter related; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | Twin-arginine translocation pathway signal. | 0.402 |